STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16561.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
AHC16486.1
Polysaccharide biosynthesis protein.
  
  
 0.917
AHC16145.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.916
AHC16488.1
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
  
  
 0.860
AHC16477.1
UDP-glucose dehydrogenase.
  
  
 0.844
AHC16493.1
UDP-glucose dehydrogenase.
  
  
 0.844
AHC16536.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.798
AHC15285.1
Cytidylyltransferase domain protein.
  
  
 0.713
AHC15952.1
Galactokinase; Belongs to the GHMP kinase family.
 
  
 0.588
AHC14466.1
Putative aminotransferase, DegT family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.580
AHC14548.1
Putative aminotransferase, DegT family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.580
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.