Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC16571.1Endonuclease/exonuclease/phosphatase family protein. (240 aa)    
Predicted Functional Partners:
AHC15058.1
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.672
AHC15816.1
Cysteine desulfurase.
    
   0.672
AHC16572.1
Hypothetical protein.
       0.645
AHC16687.1
Hypothetical protein.
 
   
 0.609
AHC15652.1
Hypothetical protein.
 
     0.525
AHC16050.1
Hypothetical protein.
 
  
 0.514
AHC16348.1
Beta-hexosaminidase.
 
   
 0.511
AHC16063.1
Putative nucleoside transporter yegT.
  
    0.503
AHC13957.1
Hypothetical protein.
  
   
 0.489
AHC14339.1
Colicin V production family protein.
  
    0.465
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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