Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC16679.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
AHC15675.1
Hypothetical protein.
  
    0.730
AHC16680.1
Putative secreted protein.
  
   
 0.630
AHC16379.1
Hypothetical protein.
 
     0.590
AHC16678.1
Aconitate hydratase.
     
 0.547
AHC16569.1
Hypothetical protein.
  
     0.472
AHC14937.1
Hypothetical protein.
  
    0.459
AHC14925.1
Acetyltransferase, putative.
 
    0.455
AHC16345.1
Acetyltransferase, GNAT family.
 
   
 0.443
AHC15730.1
Multifunctional fatty acid oxidation complex subunit alpha.
  
 
 0.435
AHC14136.1
Hypothetical protein.
 
     0.409
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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