Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC16686.1Putative hydrolase. (262 aa)    
Predicted Functional Partners:
AHC14059.1
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
     0.885
AHC16033.1
Putative hydrolase.
  
     0.761
AHC16416.1
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
      0.655
AHC15669.1
Acyl-CoA dehydrogenase.
  
 0.585
AHC15731.1
Butyryl-CoA dehydrogenase.
  
 0.585
AHC16384.1
Hypothetical protein.
    
 0.577
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.553
AHC13989.1
Putative oxidoreductase/Short-chain dehydrogenase.
 
 0.533
AHC15629.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
 0.524
AHC15502.1
Retinol dehydrogenase 13; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.487
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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