Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC16760.1Putative amino-acid ABC transporter ATP-binding protein y4tH. (270 aa)    
Predicted Functional Partners:
AHC16758.1
Amino acid ABC transporter, permease protein.
 0.999
AHC16759.1
Amino acid ABC transporter permease.
 0.999
AHC15978.1
Amino acid ABC transporter, amino acid-binding/permease protein.
 
 0.996
AHC16757.1
Amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 
 0.918
AHC14476.1
ABC transporter permease protein.
 
 
    0.900
AHC15830.1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 
   
0.900
AHC14031.1
ABC transporter ATP-binding protein.
     
0.899
AHC15827.1
Dipeptide transport system permease protein DppC.
    
 0.891
AHC16743.1
ABC transporter, ATP-binding/permease protein.
     
0.875
AHC15611.1
ABC transporter, ATP-binding/permease protein.
     
0.839
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: medium (46%) [HD]