Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
AHC16762.1Lipoprotein. (268 aa)    
Predicted Functional Partners:
AHC16030.1
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.817
AHC14476.1
ABC transporter permease protein.
    
 
 0.609
AHC13472.1
Outer membrane efflux protein.
   
   0.595
AHC14593.1
Hypothetical protein.
    
   0.543
AHC15149.1
RNA polymerase sigma factor RpoD.
    
   0.543
AHC16761.1
Hypothetical protein.
       0.540
AHC14473.1
Membrane-fusion protein.
  
   0.517
AHC16225.1
Succinate dehydrogenase flavoprotein subunit.
    
   0.471
AHC13753.1
ABC transporter, ATP-binding protein.
   
 
 0.466
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 
 0.466
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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