STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16766.1Glycine betaine ABC transport system, permease protein OpuAB. (283 aa)    
Predicted Functional Partners:
AHC14419.1
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.
 
 0.999
AHC16765.1
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.
 
 0.999
AHC16767.1
Glycine betaine ABC transport system, ATP-binding protein OpuAA.
 0.999
AHC15514.1
Osmoprotectant ABC transporter binding protein YehZ.
 
 
  
 0.919
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.544
AHC16768.1
Hypothetical protein.
       0.507
AHC15512.1
L-proline glycine betaine ABC transport system permease protein ProV.
 
  
 0.405
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.402
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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