Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC16773.1Gamma-tocopherol methyltransferase, delta-tocopherol methyltransferase. (308 aa)    
Predicted Functional Partners:
AHC16774.1
Hypothetical protein.
     
 0.785
AHC16771.1
Hypothetical protein.
 
   
 0.664
AHC16770.1
Putative membrane protein.
 
     0.607
AHC16775.1
Hypothetical protein.
       0.574
AHC16769.1
ABC transporter, permease protein, putative.
       0.537
AHC15077.1
Cryptochrome; Belongs to the DNA photolyase family.
  
     0.426
AHC13914.1
DedA family protein, putative.
  
     0.420
AHC16158.1
Hypothetical protein.
  
     0.418
AHC16588.1
N-acetylglutamate synthase; Belongs to the acetyltransferase family.
 
   
 0.409
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.