STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ63406.1Ferredoxin. (69 aa)    
Predicted Functional Partners:
AKJ63407.1
Hypothetical protein.
 
     0.895
AKJ63405.1
NADH dehydrogenase subunit I.
 
  
 0.833
AKJ63404.1
Cell division ATPase MinD.
 
  
 0.828
AKJ63402.1
Dinitrogenase iron-molybdenum cofactor.
 
     0.704
AKJ63410.1
Dinitrogenase iron-molybdenum cofactor biosynthesis protein.
 
     0.628
AKJ63403.1
Pyridoxamine 5'-phosphate oxidase.
 
     0.622
AKJ65101.1
Putative molybdenum cofactor biosynthesis protein A.
 
     0.612
AKJ64086.1
Hypothetical protein.
 
     0.479
AKJ63732.1
Dinitrogenase iron-molybdenum cofactor.
  
     0.419
AKJ63408.1
Hypothetical protein.
       0.403
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.