STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ63529.1Gliding motility-associated ABC transporter permease protein GldF. (254 aa)    
Predicted Functional Partners:
AKJ63528.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
 0.976
yxlF_1
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.974
AKJ63527.1
Hypothetical protein.
 
     0.902
yxlF_3
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.892
AKJ65705.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
 0.794
AKJ63526.1
Hypothetical protein.
       0.773
AKJ63531.1
Na+-dependent transporters of the SNF family protein; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
       0.773
infA_1
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
       0.664
yxlF_2
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.614
AKJ65704.1
Hypothetical protein.
  
     0.488
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.