STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ63613.1Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family. (351 aa)    
Predicted Functional Partners:
AKJ64106.1
Putative oxygen-independent coproporphyrinogen-III oxidase 1; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
 
 0.902
AKJ64160.1
Methylcobalamin methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.775
AKJ64686.1
Hypothetical protein.
 
     0.773
AKJ65148.1
Putative methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.772
AKJ63835.1
Hypothetical protein.
  
     0.769
hemE_1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.769
AKJ65473.1
Putative methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.768
AKJ65160.1
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.729
AKJ64384.1
Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.725
AKJ65660.1
Putative metal-binding protein.
 
    0.667
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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