STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ63659.1NAD-reducing hydrogenase subunit HoxF. (594 aa)    
Predicted Functional Partners:
AKJ63662.1
NAD-reducing hydrogenase subunit HoxE.
 0.999
AKJ64552.1
NAD-reducing hydrogenase subunit HoxE.
 0.999
AKJ64554.1
Fe-only hydrogenase subunit gamma.
 0.999
AKJ63658.1
Periplasmic [Fe] hydrogenase large subunit.
 
 0.991
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.985
AKJ65699.1
Putative transketolase.
  
 
 0.950
AKJ64551.1
NAD-reducing hydrogenase subunit HoxF.
 
0.946
AKJ64583.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.941
fdx5
2Fe-2S ferredoxin-5.
  
 
 0.940
hndD_2
Fe-only hydrogenase large subunit.
 
 
 0.938
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.