STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaAL-rhamnose isomerase; Belongs to the rhamnose isomerase family. (424 aa)    
Predicted Functional Partners:
rhaB
Rhamnulokinase.
 
 0.998
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.963
ddlB
D-alanine--D-alanine ligase B; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.615
AKJ63744.1
Cell division protein FtsQ; Essential cell division protein.
       0.615
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
       0.603
ftsZ
Cell division protein FtsZ.
       0.603
AKJ63667.1
Putative xylulose kinase.
  
  
 0.523
AKJ65105.1
Putative xylulose kinase.
  
  
 0.523
AKJ63673.1
L-fucose isomerase.
  
   
 0.422
AKJ65183.1
Short chain dehydrogenase.
 
   
 0.400
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.