STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupR1Hydrogenase transcriptional regulatory protein hupR1. (222 aa)    
Predicted Functional Partners:
AKJ63891.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
    0.707
AKJ63805.1
Multi-sensor hybrid histidine kinase.
 
 
 0.649
AKJ63536.1
Multi-sensor hybrid histidine kinase.
 
 
 0.630
AKJ65334.1
Sensor histidine kinase.
 
 
 0.588
AKJ64234.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensors.
 
 
 0.582
AKJ63542.1
Multi-sensor hybrid histidine kinase.
 
 
 0.545
AKJ64651.1
Multi-sensor hybrid histidine kinase.
 
 
 0.544
AKJ64908.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.535
barA
Signal transduction histidine-protein kinase BarA.
 
 
 0.523
rpfC
Sensory/regulatory protein RpfC.
 
 
 0.518
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.