STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapH2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. (171 aa)    
Predicted Functional Partners:
lacA_1
Galactoside O-acetyltransferase.
 
    
0.827
mshA_3
D-inositol 3-phosphate glycosyltransferase.
  
    0.778
AKJ63901.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
  
    0.778
epsD
Putative glycosyltransferase EpsD.
  
    0.778
AKJ63905.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
  
    0.778
lacA_2
Galactoside O-acetyltransferase.
 
    
0.609
AKJ63899.1
Putative acetyltransferase.
 
    
0.607
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.547
AKJ63907.1
N-glycosyltransferase.
       0.500
ptk
Tyrosine-protein kinase ptk.
  
  
 0.436
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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