STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccpA_1LacI family transcriptional regulator. (321 aa)    
Predicted Functional Partners:
AKJ63644.1
LacI family transcriptional regulator.
  
     0.775
AKJ64609.1
LacI family transcriptional regulator.
  
     0.775
AKJ65626.1
LacI family transcriptional regulator.
  
     0.774
AKJ65629.1
LacI family transcriptional regulator.
  
     0.774
ccpA_2
LacI family transcriptional regulator.
  
     0.774
araR_1
Arabinose metabolism transcriptional repressor.
  
     0.717
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
 
 0.613
AKJ63608.1
Sugar transport system permease protein.
 
  
 0.575
AKJ63914.1
Putative oxidoreductase.
  
   0.554
AKJ64986.1
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.531
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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