STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ63997.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
AKJ63999.1
Type II secretory pathway, component PulK.
  
 
 0.851
AKJ63998.1
General secretion pathway protein J.
  
   0.841
AKJ63996.1
Tfp pilus assembly protein FimT.
  
    0.776
epsF_3
General secretion pathway protein F.
  
    0.705
xcpT_1
PilD-dependent protein PddA.
       0.631
ysdC
Putative aminopeptidase YsdC.
       0.602
orn
Oligoribonuclease.
       0.527
AKJ64001.1
Hypothetical protein.
  
  
 0.484
gspD
Putative general secretion pathway protein D.
  
    0.481
AKJ64000.1
Type II secretory pathway, component PulL.
  
    0.476
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.