STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ63999.1Type II secretory pathway, component PulK. (362 aa)    
Predicted Functional Partners:
AKJ63998.1
General secretion pathway protein J.
  
 
 0.946
AKJ63997.1
Hypothetical protein.
  
 
 0.851
xcpT_1
PilD-dependent protein PddA.
 
 
 0.827
AKJ63996.1
Tfp pilus assembly protein FimT.
       0.782
AKJ63445.1
Pilus assembly protein.
  
 
 0.773
AKJ63568.1
Hypothetical protein; Prepilin-type N-terminal cleavage/methylation domain.
  
 
 0.773
xcpT_3
PilD-dependent protein PddA.
 
 
 0.709
gspD
Putative general secretion pathway protein D.
 
   
 0.659
epsF_3
General secretion pathway protein F.
     
 0.644
AKJ65610.1
Type II secretion system protein G.
 
 
 0.612
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.