STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exbD_2Biopolymer transport protein ExbD. (135 aa)    
Predicted Functional Partners:
exbB_3
Biopolymer transport protein ExbB.
 
   0.924
AKJ64800.1
Biopolymer transport protein ExbB.
  
   0.845
AKJ64101.1
Biopolymer transport protein TolR.
 
    
0.812
exbB_7
Biopolymer transport protein ExbB.
  
   0.805
AKJ65464.1
Colicin uptake protein TolQ.
  
   0.803
AKJ64799.1
ExbB proton channel family protein.
  
   0.793
exbB_2
Biopolymer transport protein ExbB.
  
   0.774
AKJ64102.1
Hypothetical protein.
       0.773
exbB_4
Biopolymer transport protein ExbB.
  
   0.771
exbB_8
Biopolymer transport protein ExbB.
  
   0.716
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.