STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycjSPutative oxidoreductase YcjS. (388 aa)    
Predicted Functional Partners:
AKJ64393.1
Hydroxypyruvate isomerase.
 
    0.894
ligC_2
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase.
 
     0.762
AKJ64388.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.697
AKJ64389.1
Putative membrane protein.
       0.697
AKJ64390.1
Hypothetical protein.
       0.697
AKJ64394.1
Oxidoreductase domain protein.
 
     0.627
AKJ63818.1
Hypothetical protein.
  
     0.584
AKJ64385.1
Hypothetical protein.
  
     0.520
AKJ64392.1
AraC family transcriptional regulator.
  
    0.492
afr_2
1,5-anhydro-D-fructose reductase.
  
     0.491
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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