STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ64443.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
mshA_4
D-inositol 3-phosphate glycosyltransferase.
 
     0.945
htrB
Lipid A biosynthesis lauroyl acyltransferase.
       0.786
AKJ65049.1
Carbohydrate binding module family protein.
  
     0.621
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
       0.516
AKJ64441.1
Putative transcriptional regulatory protein.
       0.516
mfpsA_1
Mannosylfructose-phosphate synthase.
 
     0.493
AKJ64745.1
Hypothetical protein.
  
     0.410
AKJ65153.1
Hypothetical protein.
  
     0.407
AKJ65159.1
Beta-galactosidase.
  
     0.407
AKJ63298.1
Putative protein involved in outer membrane biogenesis.
  
     0.400
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.