STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atsA_18Arylsulfatase. (621 aa)    
Predicted Functional Partners:
AKJ64588.1
Arylsulfatase.
 
    
0.778
AKJ64589.1
Hypothetical protein.
       0.705
AKJ64586.1
Glycosyl hydrolase family protein.
       0.625
yicJ
Inner membrane symporter YicJ.
       0.484
AKJ64590.1
Hypothetical protein.
       0.481
AKJ64591.1
Transposase.
       0.481
AKJ64584.1
Type II secretion system protein G.
       0.402
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.