STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ64607.1D-arabitol-phosphate dehydrogenase. (325 aa)    
Predicted Functional Partners:
gutB_1
Sorbitol dehydrogenase.
  
  
 
0.927
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
     
 0.907
AKJ65248.1
Carbohydrate kinase.
  
 
 0.904
fruA_2
EIIABC-Fru.
   
 
  0.901
gutB_2
Sorbitol dehydrogenase.
 
    
0.820
AKJ64604.1
Arylsulfatase.
  
    0.776
kojP_1
Kojibiose phosphorylase.
  
    0.776
AKJ64603.1
Hypothetical protein.
       0.773
AKJ64602.1
Hypothetical protein.
       0.658
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.559
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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