Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ64744.1 | AKJ64745.1 | L21SP4_01499 | L21SP4_01500 | CAAX amino terminal protease self- immunity. | Hypothetical protein. | 0.773 |
AKJ64744.1 | rhaB | L21SP4_01499 | L21SP4_01498 | CAAX amino terminal protease self- immunity. | Rhamnulokinase. | 0.550 |
AKJ64744.1 | tatD | L21SP4_01499 | L21SP4_01501 | CAAX amino terminal protease self- immunity. | Deoxyribonuclease TatD. | 0.651 |
AKJ64745.1 | AKJ64744.1 | L21SP4_01500 | L21SP4_01499 | Hypothetical protein. | CAAX amino terminal protease self- immunity. | 0.773 |
AKJ64745.1 | rhaB | L21SP4_01500 | L21SP4_01498 | Hypothetical protein. | Rhamnulokinase. | 0.550 |
AKJ64745.1 | tatD | L21SP4_01500 | L21SP4_01501 | Hypothetical protein. | Deoxyribonuclease TatD. | 0.651 |
AKJ64747.1 | tatD | L21SP4_01502 | L21SP4_01501 | Putative RNA-binding protein containing a PIN domain protein. | Deoxyribonuclease TatD. | 0.423 |
dnaX_1 | tatD | L21SP4_00515 | L21SP4_01501 | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Deoxyribonuclease TatD. | 0.470 |
metG | tatD | L21SP4_01809 | L21SP4_01501 | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Deoxyribonuclease TatD. | 0.434 |
rhaB | AKJ64744.1 | L21SP4_01498 | L21SP4_01499 | Rhamnulokinase. | CAAX amino terminal protease self- immunity. | 0.550 |
rhaB | AKJ64745.1 | L21SP4_01498 | L21SP4_01500 | Rhamnulokinase. | Hypothetical protein. | 0.550 |
rhaB | tatD | L21SP4_01498 | L21SP4_01501 | Rhamnulokinase. | Deoxyribonuclease TatD. | 0.475 |
tatD | AKJ64744.1 | L21SP4_01501 | L21SP4_01499 | Deoxyribonuclease TatD. | CAAX amino terminal protease self- immunity. | 0.651 |
tatD | AKJ64745.1 | L21SP4_01501 | L21SP4_01500 | Deoxyribonuclease TatD. | Hypothetical protein. | 0.651 |
tatD | AKJ64747.1 | L21SP4_01501 | L21SP4_01502 | Deoxyribonuclease TatD. | Putative RNA-binding protein containing a PIN domain protein. | 0.423 |
tatD | dnaX_1 | L21SP4_01501 | L21SP4_00515 | Deoxyribonuclease TatD. | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.470 |
tatD | metG | L21SP4_01501 | L21SP4_01809 | Deoxyribonuclease TatD. | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.434 |
tatD | rhaB | L21SP4_01501 | L21SP4_01498 | Deoxyribonuclease TatD. | Rhamnulokinase. | 0.475 |
tatD | ywlE | L21SP4_01501 | L21SP4_01851 | Deoxyribonuclease TatD. | Low molecular weight protein-tyrosine-phosphatase YwlE; Belongs to the SUA5 family. | 0.406 |
ywlE | tatD | L21SP4_01851 | L21SP4_01501 | Low molecular weight protein-tyrosine-phosphatase YwlE; Belongs to the SUA5 family. | Deoxyribonuclease TatD. | 0.406 |