STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ64818.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (56 aa)    
Predicted Functional Partners:
AKJ63658.1
Periplasmic [Fe] hydrogenase large subunit.
   
 
 0.921
AKJ64583.1
Pyridine nucleotide-disulfide oxidoreductase.
  
 
 0.817
etfB
Electron transfer flavoprotein small subunit.
   
 
 0.757
AKJ64074.1
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.563
fur
Ferric uptake regulation protein; Belongs to the Fur family.
       0.506
AKJ63662.1
NAD-reducing hydrogenase subunit HoxE.
   
 
 0.498
AKJ64552.1
NAD-reducing hydrogenase subunit HoxE.
   
 
 0.498
AKJ64554.1
Fe-only hydrogenase subunit gamma.
   
 
 0.498
hndD_2
Fe-only hydrogenase large subunit.
   
 
 0.458
AKJ64556.1
Fe-only hydrogenase subunit alpha.
   
 
 0.458
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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