STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfaFADP-heptose--LPS heptosyltransferase 2. (413 aa)    
Predicted Functional Partners:
AKJ64050.1
D-glycero-beta-D-manno-heptose 7-phosphate kinase.
 
  
 0.673
hldE_2
Bifunctional protein HldE.
 
  
 0.669
AKJ63659.1
NAD-reducing hydrogenase subunit HoxF.
  
   0.663
rfaQ
Lipopolysaccharide core heptosyltransferase RfaQ.
  
     0.639
fdx5
2Fe-2S ferredoxin-5.
   
 
 0.617
AKJ65061.1
Putative membrane protein.
       0.520
purL_1
Phosphoribosylformylglycinamidine synthase.
       0.410
AKJ65058.1
Hypothetical protein.
       0.410
AKJ65059.1
Hypothetical protein.
       0.410
purL_2
Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
       0.410
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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