STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macBMacrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family. (662 aa)    
Predicted Functional Partners:
aaeA
P-hydroxybenzoic acid efflux pump subunit AaeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.964
mdtA_1
Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.957
mdtA_2
Multidrug transporter MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.957
AKJ65141.1
Outer membrane channel protein.
 
 
 0.927
AKJ64281.1
Putative efflux pump membrane fusion protein.
  
 
 0.890
cusC
Cation efflux system protein CusC precursor.
 
 
 0.864
AKJ64036.1
Outer membrane channel protein.
 
 
 0.863
ttgI
Toluene efflux pump outer membrane protein TtgI precursor.
 
 
 0.838
ytrF
ABC transporter permease YtrF precursor.
 
 
0.765
AKJ64812.1
Lipoprotein releasing system, transmembrane protein, LolC/E family.
  
 
 0.745
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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