STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ65146.1Putative alpha-mannosidase. (955 aa)    
Predicted Functional Partners:
AKJ65144.1
Na+/melibiose symporter-like transporter.
 
     0.846
AKJ65145.1
Hypothetical protein.
       0.773
AKJ65159.1
Beta-galactosidase.
 
   
 0.688
AKJ65049.1
Carbohydrate binding module family protein.
  
    0.669
AKJ63835.1
Hypothetical protein.
  
     0.611
AKJ65153.1
Hypothetical protein.
  
     0.581
galK
Galactokinase; Belongs to the GHMP kinase family.
  
    0.513
AKJ65610.1
Type II secretion system protein G.
  
     0.501
AKJ65556.1
Alpha-L-rhamnosidase.
  
     0.460
xylR_5
Xylose operon regulatory protein.
  
    0.449
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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