STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fniIsopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (370 aa)    
Predicted Functional Partners:
AKJ65327.1
Diphosphomevalonate decarboxylase.
 
  
 0.987
AKJ65330.1
Hydroxymethylglutaryl-coenzyme A synthase.
 
  
 0.955
AKJ65398.1
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.918
AKJ65328.1
Mevalonate kinase; Belongs to the GHMP kinase family.
 
  
 0.883
AKJ65329.1
Putative mevalonate kinase.
 
  
 0.880
AKJ64232.1
Hydroxymethylglutaryl-CoA reductase (NADPH).
 
   
 0.741
AKJ65332.1
Hypothetical protein.
       0.655
zraS_1
Sensor protein ZraS.
       0.571
AKJ65334.1
Sensor histidine kinase.
       0.571
fabF_2
3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.571
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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