STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolCLipoprotein-releasing system transmembrane protein LolC. (409 aa)    
Predicted Functional Partners:
lolD_2
Lipoprotein-releasing system ATP-binding protein LolD.
 0.987
pal
Minor outer membrane protein Omp16; Belongs to the Pal lipoprotein family.
  
 
 0.764
macB
Macrolide export ATP-binding/permease protein MacB; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
 0.745
exbB_1
Biopolymer transport protein ExbB.
  
    0.723
AKJ65106.1
OmpA/MotB domain protein.
  
  
 0.694
bamA
Outer membrane protein Omp85.
 
   
 0.679
bceA
Bacitracin export ATP-binding protein BceA.
 
 0.660
AKJ65114.1
ABC transporter ATPase.
 
 0.646
AKJ65341.1
Putative ATP:guanido phosphotransferase.
       0.640
AKJ65342.1
Putative protein with conserved CXXC pairs.
       0.639
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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