STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbUPhosphoserine phosphatase RsbU. (483 aa)    
Predicted Functional Partners:
rsbV
Anti-anti-sigma-B factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.902
AKJ65406.1
Anti-sigma F factor antagonist.
 
 
 0.899
AKJ63891.1
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.870
AKJ63752.1
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.824
AKJ63379.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensors.
 
 0.796
AKJ64497.1
Response regulator receiver modulated serine phosphatase.
 
 
0.784
rsbT
Serine/threonine-protein kinase RsbT.
  
 
 0.738
AKJ64498.1
Hypothetical protein.
  
  
 0.687
AKJ63805.1
Multi-sensor hybrid histidine kinase.
 
 0.661
tagA_1
Putative N-acetylmannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
  
 
 0.640
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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