STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ65659.1AraC family transcriptional regulator. (399 aa)    
Predicted Functional Partners:
AKJ65262.1
AraC family transcriptional regulator.
  
   0.794
AKJ63696.1
AraC family transcriptional regulator.
  
   0.792
AKJ64159.1
AraC family transcriptional regulator.
  
   0.792
AKJ65602.1
AraC family transcriptional regulator.
  
     0.773
AKJ64392.1
AraC family transcriptional regulator.
  
    0.769
xylR_8
Xylose operon regulatory protein.
  
    0.718
xylR_7
Xylose operon regulatory protein.
  
 
 0.680
AKJ65660.1
Putative metal-binding protein.
 
     0.512
fhs
Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.
       0.508
acsE_2
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
       0.508
Your Current Organism:
Kiritimatiella glycovorans
NCBI taxonomy Id: 1307763
Other names: DSM 26986, JCM 19195, K. glycovorans, Kiritimatiella glycovorans Spring et al. 2017, Verrucomicrobia bacterium L21-Fru-AB, bacterium L21-Fru-AB, strain L21-Fru-AB
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