STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO13741.1Putative glutamate synthase (NADPH) small subunit. (1076 aa)    
Predicted Functional Partners:
hndD_1
NADP-reducing hydrogenase subunit HndC.
  
 
 0.953
hndD_2
NADP-reducing hydrogenase subunit HndC.
  
 
 0.953
ALO15150.1
Putative NADH oxidase.
  
 
 0.952
mop
Aldehyde oxidoreductase.
  
 
 0.942
rnfB
Nitrogen fixation protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.915
ALO14081.1
Abi-like protein.
  
 0.900
gltD_1
Glutamate synthase [NADPH] small chain.
 
 
 0.897
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.882
glnA_2
Glutamine synthetase.
 
  
 0.835
gltD_2
Glutamate synthase [NADPH] small chain.
  
 
 0.794
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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