STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoP_1Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. (123 aa)    
Predicted Functional Partners:
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 0.899
rpfC_3
Sensory/regulatory protein RpfC.
 
 
 0.897
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 0.894
divL
Sensor protein DivL.
 
 
 0.888
yycG_2
Sensor histidine kinase YycG.
 
 
 0.888
luxQ_9
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 0.886
barA_1
Signal transduction histidine-protein kinase BarA.
 
 
 0.884
senX3_1
Signal-transduction histidine kinase senX3.
 
 
 0.884
barA_6
Signal transduction histidine-protein kinase BarA.
 
 
 0.884
divJ_3
Histidine protein kinase DivJ.
 
 
 0.884
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.