STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO14278.14-amino-4-deoxy-L-arabinose transferase. (560 aa)    
Predicted Functional Partners:
ALO16009.1
Lipoprotein.
  
     0.566
miaA_1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.559
ALO13944.1
Hypothetical protein; Por secretion system C-terminal sorting domain.
  
     0.526
ALO15109.1
Putative glucosyl-3-phosphoglycerate synthase.
 
    0.504
ALO15688.1
Putative iron-regulated membrane protein.
  
     0.490
ALO16064.1
Enterobactin receptor protein.
  
     0.476
ALO14279.1
Hypothetical protein.
 
    0.462
ALO14743.1
Hypothetical protein.
  
     0.439
ALO15275.1
Xyloglucanase precursor.
  
     0.405
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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