STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO14359.1PASTA domain protein. (266 aa)    
Predicted Functional Partners:
rluD
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
  
    0.809
ALO14855.1
Putative protein phosphatase 2C-type.
  
 
 0.793
ALO14358.1
Hypothetical protein; Por secretion system C-terminal sorting domain.
       0.792
rpmH
50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.
     
 0.617
ALO15442.1
Hypothetical protein.
  
     0.608
ALO15735.1
Hypothetical protein.
  
     0.607
ALO14360.1
FO synthase subunit 2.
       0.595
mrcA
Penicillin-binding protein 1A.
 
  
 0.566
ALO15168.1
Hypothetical protein.
 
  
 0.528
ALO14362.1
Hypothetical protein.
       0.494
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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