STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zraS_1Sensor protein ZraS. (505 aa)    
Predicted Functional Partners:
spo0F
Sporulation initiation phosphotransferase F.
 
   0.926
prkC
Serine/threonine-protein kinase PrkC.
     0.922
pleD_2
Stalked cell differentiation-controlling protein.
 
 0.906
ALO17328.1
Putative ATPase.
 
     0.887
pleD_3
Stalked cell differentiation-controlling protein.
 
 0.880
mtrA
DNA-binding response regulator MtrA.
 
 0.877
luxQ_13
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 0.847
luxQ_5
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 
 0.816
arcB_7
Aerobic respiration control sensor protein ArcB.
 
 0.810
divL
Sensor protein DivL.
 
 
 0.789
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.