STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prsAFoldase protein PrsA precursor. (882 aa)    
Predicted Functional Partners:
surA_2
Peptidyl-prolyl cis-trans isomerase SurA.
  
     0.676
lepB
Signal peptidase I.
  
  
 0.523
mltD_1
Membrane-bound lytic murein transglycosylase D precursor.
 
     0.520
yidC
Oxa1Ec; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
  
 0.511
ALO14859.1
AP2 domain protein.
       0.510
ALO14860.1
Hypothetical protein.
       0.510
mltD_2
Membrane-bound lytic murein transglycosylase D precursor.
  
     0.500
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.425
ALO17101.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.412
ompA_1
Outer membrane protein II*.
  
  
 0.407
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.