STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hlyBAlpha-hemolysin translocation ATP-binding protein HlyB. (727 aa)    
Predicted Functional Partners:
hlyD_1
Hemolysin secretion protein D, chromosomal.
 
 
 0.889
ALO14877.1
Hypothetical protein.
  
 
 0.889
hlyD_2
Hemolysin secretion protein D, chromosomal.
 
 
 0.889
gbuA
Glycine betaine/carnitine transport ATP-binding protein GbuA.
 
     
0.847
ALO14405.1
Macrolide export ATP-binding protein MacB.
 
   
0.783
ALO14879.1
Hypothetical protein.
       0.762
ALO16803.1
ATP-GRASP peptide maturase, grasp-with-spasm system.
 
     0.674
ALO14273.1
Putative multidrug export ATP-binding/permease protein.
 
 
  
0.561
ALO14881.1
Hypothetical protein.
 
     0.541
ALO14880.1
Hypothetical protein.
       0.539
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.