STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15068.1Hypothetical protein. (693 aa)    
Predicted Functional Partners:
ALO15788.1
Hypothetical protein; Por secretion system C-terminal sorting domain.
  
     0.722
ALO17078.1
Type V secretory pathway, adhesin AidA.
  
     0.674
ALO16841.1
Hypothetical protein.
 
     0.544
ALO17166.1
Microbial collagenase precursor.
 
     0.528
ALO15407.1
ABC transporter ATP-binding/permease protein.
 
     0.525
ALO16645.1
Microbial collagenase precursor.
 
     0.515
ALO16123.1
Hypothetical protein.
 
     0.508
ALO16121.1
Hypothetical protein.
 
     0.483
ALO14748.1
ABC transporter ATP-binding/permease protein.
  
     0.473
ccsA_2
Cytochrome c biogenesis protein CcsA.
       0.470
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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