STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15091.1Polysaccharide export protein Wza. (261 aa)    
Predicted Functional Partners:
wzc
Tyrosine-protein kinase wzc.
 
 
 0.994
ALO14413.1
Polysaccharide export protein Wza.
  
  
  0.975
ptk
Tyrosine-protein kinase ptk.
 
 
 0.973
etk
Tyrosine-protein kinase etk.
 
 
 0.967
gumD
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.963
ALO15271.1
Polysaccharide export protein Wza.
  
  
 
0.923
mshA_1
D-inositol 3-phosphate glycosyltransferase.
 
  
 0.878
tagO
Putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
 
  
 0.751
thrS_1
Threonine--tRNA ligase 1.
       0.687
mltD_2
Membrane-bound lytic murein transglycosylase D precursor.
       0.685
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.