STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglJN-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase. (368 aa)    
Predicted Functional Partners:
ALO15109.1
Putative glucosyl-3-phosphoglycerate synthase.
    0.837
gumD
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 0.561
tagE
Putative poly(glycerol-phosphate) alpha-glucosyltransferase.
  
     0.553
ALO15261.1
UDP-glucose 4-epimerase.
  
    0.538
galE_1
UDP-glucose 4-epimerase.
  
    0.516
yheS
Putative ABC transporter ATP-binding protein YheS.
       0.503
treZ
Malto-oligosyltrehalose trehalohydrolase; Belongs to the glycosyl hydrolase 13 family.
   
 0.426
amyB_1
Alpha-amylase 2.
   
 0.426
tuaD
UDP-glucose 6-dehydrogenase TuaD.
  
  
 0.416
rffG
dTDP-glucose 4,6-dehydratase 2.
  
    0.404
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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