STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15116.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
ALO17524.1
Beta-hexosaminidase A precursor.
  
 0.930
sglT_3
Na(+)/glucose symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     0.748
bglX_1
Periplasmic beta-glucosidase precursor.
  
 0.611
lolE_2
Lipoprotein-releasing system transmembrane protein LolE.
       0.594
bglX_2
Periplasmic beta-glucosidase precursor; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.593
ykfA
Putative murein peptide carboxypeptidase.
  
     0.507
pbpE
Penicillin-binding protein E.
    0.484
flp_3
FmtA-like protein.
    0.471
ALO16178.1
D-alanyl-D-alanine carboxypeptidase precursor.
 
    0.465
flp_2
FmtA-like protein.
 
    0.452
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.