STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15127.1Intercellular adhesin biosynthesis polysaccharide N-deacetylase. (311 aa)    
Predicted Functional Partners:
ALO15126.1
Hypothetical protein.
 
     0.886
ALO15128.1
Hypothetical protein.
       0.786
ALO15985.1
Hypothetical protein.
  
     0.710
ALO14232.1
Outer membrane N-deacetylase.
  
     0.565
ALO15530.1
Patatin-related protein.
  
     0.463
ALO16418.1
DNA alkylation repair enzyme.
  
     0.452
ALO14304.1
Hypothetical protein.
 
     0.449
upp
Uracil phosphoribosyltransferase.
  
    0.431
ALO16899.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
    0.406
gumD
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
   
 0.405
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.