STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15180.1Biopolymer transport protein ExbD/TolR. (157 aa)    
Predicted Functional Partners:
ALO15183.1
Colicin uptake protein TolQ.
 
 
 0.980
ALO15181.1
Biopolymer transport protein ExbD/TolR.
 
     0.954
ALO14637.1
Hypothetical protein.
 
 
 0.926
ALO16284.1
Hypothetical protein; TonB family C-terminal domain.
 
 
 0.881
ALO16283.1
Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.874
ALO14018.1
Colicin uptake protein TolQ.
 
 
 0.813
ALO15897.1
Hypothetical protein.
  
   
 0.776
ALO15304.1
Tetratricopeptide repeat protein.
  
   
 0.775
ALO14488.1
Hypothetical protein.
  
     0.774
ALO15182.1
Hypothetical protein.
  
    0.689
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.