STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15284.1Susd and RagB outer membrane lipoprotein. (474 aa)    
Predicted Functional Partners:
ALO15285.1
TonB-linked outer membrane protein, SusC/RagA family.
    0.940
ALO14539.1
SusD family protein.
  
 
 0.768
ALO16443.1
TonB-linked outer membrane protein, SusC/RagA family.
 
   
 0.757
ALO14538.1
TonB-linked outer membrane protein, SusC/RagA family.
   
 0.755
parB
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
  
 
 0.748
ALO17338.1
TonB-linked outer membrane protein, SusC/RagA family.
 
   
 0.737
ALO15283.1
Hypothetical protein.
       0.718
ALO16442.1
SusD family protein.
  
 
 0.690
ALO16719.1
Outer membrane cobalamin receptor protein.
  
     0.642
ALO16397.1
TonB-linked outer membrane protein, SusC/RagA family.
   
 0.629
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.