STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15351.1Type I secretion outer membrane protein, TolC family. (496 aa)    
Predicted Functional Partners:
macA_1
Macrolide-specific efflux protein MacA precursor.
 
   0.954
ALO15352.1
Macrolide export permease protein MacB.
 
 
 0.905
mdtF
Multidrug resistance protein MdtF; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.805
bepF
Efflux pump periplasmic linker BepF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.785
bepE_2
Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.682
mdtN
Multidrug resistance protein MdtN.
 
 
 0.565
ALO15917.1
Hypothetical protein.
  
     0.560
ALO17301.1
Macrolide export permease protein MacB.
 
 
 0.559
ALO17302.1
Putative Macrolide export permease protein.
 
 
 0.538
ALO17433.1
Hypothetical protein; Gliding motility-associated C-terminal domain.
  
     0.527
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.