STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15632.1Endonuclease/Exonuclease/phosphatase family protein. (334 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.727
queD_1
6-carboxy-5,6,7,8-tetrahydropterin synthase.
 
     0.704
resA_6
Thiol-disulfide oxidoreductase ResA.
       0.613
ALO14719.1
Hypothetical protein.
  
     0.542
yjjV
Putative deoxyribonuclease YjjV.
     
 0.523
thiF
Sulfur carrier protein ThiS adenylyltransferase.
       0.501
ybdL
Methionine aminotransferase.
       0.501
ALO14520.1
Mevalonate kinase.
  
     0.479
ALO14518.1
Mevalonate kinase.
  
     0.477
yhbU_2
Putative protease YhbU precursor.
 
     0.420
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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