Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALO13960.1 | mmpL8 | L21SP5_00280 | L21SP5_02010 | Lipoprotein chaperone. | Membrane transport protein mmpL8. | 0.562 |
| ALO15483.1 | mmpL8 | L21SP5_01842 | L21SP5_02010 | Colicin V production protein. | Membrane transport protein mmpL8. | 0.597 |
| ALO15647.1 | ALO15648.1 | L21SP5_02008 | L21SP5_02009 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | UDP-glucose 4-epimerase. | 0.786 |
| ALO15647.1 | atpA | L21SP5_02008 | L21SP5_02012 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.423 |
| ALO15647.1 | atpF | L21SP5_02008 | L21SP5_02014 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.411 |
| ALO15647.1 | mmpL8 | L21SP5_02008 | L21SP5_02010 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Membrane transport protein mmpL8. | 0.597 |
| ALO15648.1 | ALO15647.1 | L21SP5_02009 | L21SP5_02008 | UDP-glucose 4-epimerase. | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.786 |
| ALO15648.1 | mmpL8 | L21SP5_02009 | L21SP5_02010 | UDP-glucose 4-epimerase. | Membrane transport protein mmpL8. | 0.513 |
| ALO16797.1 | mmpL8 | L21SP5_03182 | L21SP5_02010 | Hypothetical protein. | Membrane transport protein mmpL8. | 0.753 |
| atpA | ALO15647.1 | L21SP5_02012 | L21SP5_02008 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.423 |
| atpA | atpF | L21SP5_02012 | L21SP5_02014 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.999 |
| atpA | atpG | L21SP5_02012 | L21SP5_02011 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F-ATPase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpA | atpH | L21SP5_02012 | L21SP5_02013 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | F-type ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpA | mmpL8 | L21SP5_02012 | L21SP5_02010 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Membrane transport protein mmpL8. | 0.521 |
| atpF | ALO15647.1 | L21SP5_02014 | L21SP5_02008 | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.411 |
| atpF | atpA | L21SP5_02014 | L21SP5_02012 | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
| atpF | atpG | L21SP5_02014 | L21SP5_02011 | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | F-ATPase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.999 |
| atpF | atpH | L21SP5_02014 | L21SP5_02013 | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | F-type ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
| atpF | mmpL8 | L21SP5_02014 | L21SP5_02010 | F-type ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | Membrane transport protein mmpL8. | 0.496 |
| atpG | atpA | L21SP5_02011 | L21SP5_02012 | F-ATPase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
page 1 of 2