STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALO15761.1Putative acetyltransferase. (177 aa)    
Predicted Functional Partners:
arnB_3
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.846
arnB_2
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.828
ALO15765.1
Putative acetyltransferase.
 
    
0.823
ALO15767.1
O-antigen translocase.
  
  
 0.808
rffG
dTDP-glucose 4,6-dehydratase 2.
  
  
 0.789
wbbL_2
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
     
 0.788
ALO15762.1
Putative glycosyl transferase.
  
  
 0.784
ALO15763.1
Hypothetical protein.
       0.778
ALO15771.1
Putative protein involved in methicillin resistance.
       0.778
ALO15772.1
Polysaccharide deacetylase family sporulation protein PdaB.
       0.778
Your Current Organism:
Salinivirga cyanobacteriivorans
NCBI taxonomy Id: 1307839
Other names: DSM 27204, JCM 31231, KCTC 15528, S. cyanobacteriivorans, Salinivirga cyanobacteriivorans Ben Hania et al. 2017, bacterium L21-Spi-D4, strain L21-Spi-D4
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